Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7131

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7130: 15498 - KOG3077 Uncharacterized conserved protein, at 948006 to 949396 15498 mRNA_7131: 15499 - K17800 LETM1, MDM38 LETM1 and EF-hand domain-containing protein 1, mitochondrial, at 949848 to 952557 15499 mRNA_7132: 15500 - K16938 SEPT3_9_12 septin 3/9/12, at 952780 to 954588 15500

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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949,160 - 15498 mRNA_7130 0.83 0.3
949,588 + -0.2
949,603 + 1.0
949,746 - 0.5
951,381 - 15499 mRNA_7131 0.57 1.6
951,834 - 15499 mRNA_7131 0.73 -0.9
951,941 - 15499 mRNA_7131 0.77 2.0
951,986 - 15499 mRNA_7131 0.79 -0.6
952,136 + 15499 mRNA_7131 0.84 0.2
952,262 - 15499 mRNA_7131 0.89 1.2
952,443 - 2.0
952,575 - -0.2
952,584 - 1.4
952,589 - -0.1
952,604 - -0.3
952,719 - -0.2
952,744 + -0.9
952,811 - 0.1
953,325 + 15500 mRNA_7132 0.30 -1.7