Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7112

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7111: 15479 - Interpro Subunit 11 of the general transcription factor TFIIH, at 908449 to 909688 15479 mRNA_7112: 15480 - Interpro DNA-directed RNA polymerase I subunit RPA34.5 0, at 910088 to 911391 15480 mRNA_7113: 15481 - Hypothetical Protein, at 911603 to 912181 15481

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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909,154 - 15479 mRNA_7111 0.57 0.1
909,438 + 15479 mRNA_7111 0.80 -1.8
909,592 + 2.1
909,596 + 1.1
909,730 - 0.6
909,751 - 0.2
909,878 - -0.8
909,883 + 0.6
909,885 + 0.4
909,886 - 0.9
909,892 - -0.2
909,897 + 1.8
909,903 + -0.4
909,905 - 0.3
909,906 - -1.3
910,018 + -0.2
910,020 + 0.5
910,029 - 0.8
910,029 + 0.5
910,046 - -0.5
910,068 + 0.3
910,174 - 1.9
910,440 + 15480 mRNA_7112 0.27 1.0
910,452 - 15480 mRNA_7112 0.28 0.4
910,535 + 15480 mRNA_7112 0.34 -0.8
910,929 + 15480 mRNA_7112 0.64 0.6
910,966 + 15480 mRNA_7112 0.67 -0.4
911,660 - -0.1
911,943 - 15481 mRNA_7113 0.59 2.1
912,104 - 15481 mRNA_7113 0.87 0.3