Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7077

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7076: 15444 - K17413 MRPS35 small subunit ribosomal protein S35, at 825955 to 826915 15444 mRNA_7077: 15445 - K18789 XGD1 xylogalacturonan beta-1,3-xylosyltransferase, at 827085 to 831280 15445 mRNA_7078: 15446 - Hypothetical Protein, at 831735 to 832558 15446

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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826,917 + 0.7
826,976 - 0.7
827,128 - -0.9
827,203 + 1.3
827,364 + 2.6
827,365 - 1.1
827,423 - -1.5
827,510 - 15445 mRNA_7077 0.10 -0.3
827,554 + 15445 mRNA_7077 0.11 -0.1
827,699 + 15445 mRNA_7077 0.15 0.3
828,140 - 15445 mRNA_7077 0.25 0.7
828,140 - 15445 mRNA_7077 0.25 1.2
828,301 + 15445 mRNA_7077 0.29 0.9
828,312 + 15445 mRNA_7077 0.29 -0.3
828,579 - 15445 mRNA_7077 0.36 -1.9
829,028 + 15445 mRNA_7077 0.46 0.5
829,088 - 15445 mRNA_7077 0.48 2.0
829,145 + 15445 mRNA_7077 0.49 -0.1
829,344 - 15445 mRNA_7077 0.54 0.1
829,501 - 15445 mRNA_7077 0.58 1.7
829,620 - 15445 mRNA_7077 0.60 0.6
830,669 - 15445 mRNA_7077 0.85 0.7
830,834 - 15445 mRNA_7077 0.89 -0.6
830,842 + 15445 mRNA_7077 0.90 1.2
830,973 + 0.9
831,111 + 0.1
831,121 - -0.4
831,251 + 0.2
831,270 + 0.9
831,280 + 1.0
831,372 + 0.2
831,399 - -0.8
831,412 - -0.5
831,539 + 0.2
831,556 - 0.1
831,558 - 0.5
831,558 - 0.1
831,565 - 0.4
831,575 + 1.0
831,579 + 0.1
831,584 - 1.1
831,585 + -0.5
831,586 - -1.0
831,586 - -0.1
831,592 + 0.5
831,598 - 1.6
831,604 + -0.6
831,610 + -0.4
831,653 - 0.6
831,666 + -0.2
831,756 + 0.3
831,856 + 15446 mRNA_7078 0.15 1.7