Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7070

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7069: 15437 - HMMPfam-DNA-directed RNA polymerase III subunit Rpc31-PF11705, at 806497 to 812015 15437 mRNA_7070: 15438 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 812673 to 814209 15438 mRNA_7071: 15439 - BLAST histone H3 h3.1 [Schizosaccharomyces japonicus yF..., at 814580 to 815327 15439

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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811,993 + 0.7
812,128 - 0.7
812,131 + 1.0
812,141 - -2.0
812,150 + 0.1
812,192 - 0.7
812,226 - -0.7
812,226 - 0.9
812,248 + 0.6
812,253 + 0.6
812,254 + 0.2
812,258 - 0.6
812,261 + -1.0
812,281 + 0.1
812,286 - -0.3
812,294 - -0.2
812,318 - -0.1
812,323 - -0.4
812,324 + 1.1
812,339 - -1.1
812,377 - 0.4
812,402 + -0.1
812,405 - 1.6
812,406 - 1.3
812,415 + -0.2
812,416 - 0.3
812,416 + -0.8
812,424 - 1.0
812,424 + 2.3
812,426 - -0.4
812,449 - 0.2
812,463 - -0.3
812,466 + 0.0
812,469 + 0.8
812,485 - 0.7
812,489 + -1.9
812,490 + 0.9
812,608 - -0.3
812,612 - 0.6
812,628 + 0.9
812,779 + 0.8
813,158 - 15438 mRNA_7070 0.32 -0.2
813,189 + 15438 mRNA_7070 0.34 -0.0
813,342 - 15438 mRNA_7070 0.44 -0.5
813,430 - 15438 mRNA_7070 0.49 0.7
813,478 - 15438 mRNA_7070 0.52 0.9
813,481 - 15438 mRNA_7070 0.53 0.4
813,491 + 15438 mRNA_7070 0.53 0.6
813,730 + 15438 mRNA_7070 0.69 -0.2
813,825 + 15438 mRNA_7070 0.75 1.4
814,067 - 0.6
814,185 + 2.1
814,322 + 0.2
814,333 + 0.7
814,344 - 1.5
814,354 - 1.2
814,357 - -0.3
814,357 + 0.8
814,368 + 0.3
814,407 - 0.2
814,417 - 0.3
814,472 - -0.6
814,478 - -1.0
814,532 + -0.1
814,652 + -0.8
814,665 - 15439 mRNA_7071 0.11 2.8
814,807 - 15439 mRNA_7071 0.30 0.4
814,820 - 15439 mRNA_7071 0.32 0.6