Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7068

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7067: 15435 - K13507 GAT glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate acyltransferase, at 800533 to 803766 15435 mRNA_7068: 15436 - K00167 BCKDHB, bkdA2 2-oxoisovalerate dehydrogenase E1 component beta subunit, at 804244 to 806337 15436 mRNA_7069: 15437 - HMMPfam-DNA-directed RNA polymerase III subunit Rpc31-PF11705, at 806497 to 812015 15437

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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803,567 + 0.3
803,570 + 0.5
803,584 - -0.1
803,709 - 0.3
803,722 - 0.4
803,728 - 1.9
803,756 - 1.1
803,847 - 0.4
803,869 - 0.0
803,875 - 0.9
803,877 - -1.0
803,877 - 0.4
803,885 + -0.5
803,887 - 0.0
803,894 + 1.3
803,896 + 0.4
803,914 + -0.3
803,970 - -0.3
803,971 - 0.2
804,015 - 0.5
804,028 - -1.1
804,031 - 0.3
804,110 + 0.7
804,125 + 1.9
804,142 + 0.8
804,144 + 1.4
804,144 + 0.1
804,144 + -0.4
804,147 - 0.3
804,156 - 0.5
804,165 - 0.0
804,175 - 1.4
804,180 + 1.2
804,184 + 1.3
804,338 - 1.1
804,354 + 0.8
804,371 - -1.5
804,453 + -0.0
804,466 + 15436 mRNA_7068 0.11 0.2
804,487 - 15436 mRNA_7068 0.12 -0.1
804,504 + 15436 mRNA_7068 0.12 -0.4
804,632 - 15436 mRNA_7068 0.19 0.2
805,206 + 15436 mRNA_7068 0.46 0.2
805,254 + 15436 mRNA_7068 0.48 -0.7
805,533 - 15436 mRNA_7068 0.62 -0.6
805,636 + 15436 mRNA_7068 0.66 -0.8
805,952 - 15436 mRNA_7068 0.82 -0.5
806,083 - 15436 mRNA_7068 0.88 -1.0
806,100 + 15436 mRNA_7068 0.89 -0.7
806,227 - 1.3
806,526 + 1.0
806,680 - -0.4
806,892 - 1.2
806,996 - 0.1
807,111 - 15437 mRNA_7069 0.11 0.6
807,155 - 15437 mRNA_7069 0.12 0.8