Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7042

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7041: 15409 - KOG1577 Aldo/keto reductase family proteins, at 733783 to 735045 15409 mRNA_7042: 15410 - Hypothetical Protein, at 735452 to 736654 15410 mRNA_7043: 15411 - Hypothetical Protein, at 736926 to 740766 15411

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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735,199 - -0.5
735,671 - 15410 mRNA_7042 0.18 1.9
735,776 - 15410 mRNA_7042 0.27 -1.0
735,897 + 15410 mRNA_7042 0.37 -1.0
736,084 + 15410 mRNA_7042 0.53 0.3
736,229 - 15410 mRNA_7042 0.65 0.6
736,541 + -0.1
736,665 + 0.4
736,788 + -0.9
736,794 - -0.7
736,803 + 0.4
736,806 - 1.5
736,808 - 0.1
736,811 + -0.6
736,812 - 0.0
736,825 - 0.7
736,834 - -0.1
736,834 - -1.1
736,843 + -0.1
736,855 + 0.4
736,855 - -0.8
736,856 - 0.3
736,858 + 0.6
736,898 - -0.4
736,913 + 0.5
736,917 + 0.0
736,930 + 1.1
736,935 - 1.5
736,960 + -0.4
736,964 - 0.3
736,972 + 1.2
736,977 - -0.4
736,980 + 1.4
736,986 + -0.2
736,993 - -0.1
737,001 - 0.7
737,002 + 1.2
737,026 - 0.3
737,031 + 0.8
737,032 - 1.5
737,056 + -2.0
737,069 - 0.1
737,081 + 2.2
737,084 - 0.4
737,098 + 0.8
737,098 - 0.6
737,109 - 0.1
737,119 - -0.9
737,119 + -0.2
737,122 - 1.4
737,128 - -0.3
737,143 - 1.0
737,146 - 0.7
737,156 - 1.2
737,157 - 0.3
737,157 + 0.2
737,161 - -0.1
737,163 - -0.4
737,163 + -0.6
737,166 + 1.7
737,168 + -0.1
737,169 - -0.1
737,171 - -0.2
737,175 + 1.5
737,179 + 0.2
737,183 + -0.0
737,198 + -0.1
737,320 - 15411 mRNA_7043 0.10 -0.1
737,327 + 15411 mRNA_7043 0.10 1.8
737,346 - 15411 mRNA_7043 0.11 -1.0
737,642 + 15411 mRNA_7043 0.19 -0.2