Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7024

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7023: 15391 - Interpro RNA polymerase I-specific transcription-initiation factor, at 696469 to 700104 15391 mRNA_7024: 15392 - K02179 BUB2 cell cycle arrest protein BUB2, at 700234 to 701558 15392 mRNA_7025: 15393 - K13122 FRG1 protein FRG1, at 701812 to 702904 15393

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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700,177 + 1.4
700,186 - 1.0
700,190 + 0.1
700,191 + -0.9
700,320 - -0.4
700,321 - -1.2
700,355 + -0.5
700,440 - 15392 mRNA_7024 0.16 1.0
700,463 - 15392 mRNA_7024 0.17 -1.0
700,759 + 15392 mRNA_7024 0.40 0.5
700,894 + 15392 mRNA_7024 0.50 0.0
701,057 - 15392 mRNA_7024 0.62 -0.2
701,058 + 15392 mRNA_7024 0.62 -0.1
701,067 - 15392 mRNA_7024 0.63 -2.5
701,190 - 15392 mRNA_7024 0.72 -0.0
701,492 - 1.0
701,760 - -0.5
701,760 + -0.4
701,762 + 1.2
701,850 + -0.6
702,019 - 15393 mRNA_7025 0.19 -0.2