Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6996

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6995: 15363 - K15323 TSEN34 tRNA-splicing endonuclease subunit Sen34, at 626622 to 627882 15363 mRNA_6996: 15364 - Hypothetical Protein, at 628009 to 630189 15364 mRNA_6997: 15365 - K17053 ABP140 tRNAThr (cytosine32-N3)-methyltransferase, at 630254 to 632002 15365

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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627,940 - 0.2
627,945 - 0.9
627,946 + -0.5
627,948 + 0.7
628,213 + 1.0
628,216 - -1.5
628,257 + 15364 mRNA_6996 0.11 -0.5
628,384 - 15364 mRNA_6996 0.17 0.3
628,486 + 15364 mRNA_6996 0.22 2.3
628,510 + 15364 mRNA_6996 0.23 1.1
628,653 - 15364 mRNA_6996 0.30 0.2
628,678 - 15364 mRNA_6996 0.31 0.3
628,689 - 15364 mRNA_6996 0.31 1.6
628,958 + 15364 mRNA_6996 0.44 2.2
629,009 + 15364 mRNA_6996 0.46 1.5
629,137 + 15364 mRNA_6996 0.52 1.5
629,139 - 15364 mRNA_6996 0.52 -0.6
629,248 - 15364 mRNA_6996 0.57 -0.4
629,412 - 15364 mRNA_6996 0.64 1.3
629,710 - 15364 mRNA_6996 0.78 -0.8
629,855 - 15364 mRNA_6996 0.85 1.4
629,872 - 15364 mRNA_6996 0.85 0.6
629,885 - 15364 mRNA_6996 0.86 0.7
630,289 + -0.2
630,581 - 15365 mRNA_6997 0.19 -0.4
630,641 + 15365 mRNA_6997 0.22 -0.4
630,709 - 15365 mRNA_6997 0.26 -0.7
631,029 + 15365 mRNA_6997 0.44 0.2