Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6984

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6983: 15351 - K02145 ATPeV1A, ATP6A V-type H+-transporting ATPase subunit A, at 596836 to 599468 15351 mRNA_6984: 15352 - HMMPfam-Fungal specific transcription factor domain-PF04082, at 599695 to 602665 15352 mRNA_6985: 15353 - BLAST chitin deacetylase [Moniliophthora roreri MCA 2997], at 602865 to 604394 15353

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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599,491 - 1.4
599,582 + -0.9
599,865 + 0.2
599,883 - 0.9
600,335 + 15352 mRNA_6984 0.22 0.7
601,225 + 15352 mRNA_6984 0.51 0.3
601,538 + 15352 mRNA_6984 0.62 -0.6
601,793 - 15352 mRNA_6984 0.71 0.5
601,963 + 15352 mRNA_6984 0.76 0.4
601,968 - 15352 mRNA_6984 0.77 0.7
602,072 - 15352 mRNA_6984 0.80 0.1
602,394 - -1.9
602,499 - 0.1
602,531 - 0.6
602,673 - -0.0
602,674 - 2.0
602,680 + 0.3
602,694 - -0.2
602,694 - -0.1
602,715 - -1.4
602,715 - 1.2
602,716 + 0.8
602,717 - 0.7
602,733 + 0.5
602,750 - 1.1
602,801 - -0.2
602,828 - -1.0
602,857 + -0.4
603,083 + 15353 mRNA_6985 0.14 0.2
603,264 - 15353 mRNA_6985 0.26 -0.4
603,271 - 15353 mRNA_6985 0.27 0.8
603,374 + 15353 mRNA_6985 0.33 -0.5
603,421 + 15353 mRNA_6985 0.36 -0.9
603,424 + 15353 mRNA_6985 0.37 -0.3
603,588 - 15353 mRNA_6985 0.47 1.7
603,591 - 15353 mRNA_6985 0.47 0.3