Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6933

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6933: 15301 - KOG0810 SNARE protein Syntaxin 1 and related proteins, at 467075 to 468286 15301 mRNA_6934: 15302 - K12871 CCDC12 coiled-coil domain-containing protein 12, at 468467 to 469312 15302

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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467,185 - 0.7
467,262 - 15301 mRNA_6933 0.15 1.5
467,518 + 15301 mRNA_6933 0.37 -1.3
467,620 - 15301 mRNA_6933 0.45 0.1
467,630 + 15301 mRNA_6933 0.46 1.5
467,743 - 15301 mRNA_6933 0.55 -0.6
468,025 - 15301 mRNA_6933 0.78 -0.6
468,352 - 1.6
468,454 - 0.2
468,591 - 15302 mRNA_6934 0.15 0.7
469,209 + 15302 mRNA_6934 0.88 1.9