Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6923

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6922: 15290 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 436165 to 438557 15290 mRNA_6923: 15291 - Hypothetical Protein, at 439430 to 443984 15291 mRNA_6924: 15292 - BLAST PC-Esterase [Xanthophyllomyces dendrorhous], at 444538 to 446309 15292

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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438,627 - 1.0
438,782 - -0.0
438,813 + 1.5
439,209 + 0.0
439,432 - 3.1
439,748 + 0.9
439,878 - -0.1
439,947 + 15291 mRNA_6923 0.11 0.1
439,947 + 15291 mRNA_6923 0.11 1.4
440,131 + 15291 mRNA_6923 0.15 -0.8
440,771 + 15291 mRNA_6923 0.29 0.1
440,962 + 15291 mRNA_6923 0.34 1.0
441,408 - 15291 mRNA_6923 0.43 1.0
441,422 + 15291 mRNA_6923 0.44 -0.8
441,493 + 15291 mRNA_6923 0.45 -0.7
442,042 - 15291 mRNA_6923 0.57 0.8
442,193 - 15291 mRNA_6923 0.61 0.8
442,288 - 15291 mRNA_6923 0.63 -0.4
442,557 + 15291 mRNA_6923 0.69 2.5
442,587 - 15291 mRNA_6923 0.69 -0.5
443,054 - 15291 mRNA_6923 0.80 1.1
443,603 - -1.1
443,634 - -0.7
443,757 + 0.7
443,907 - -0.2
443,920 - 1.1
444,077 - 1.0
444,081 - 0.1
444,230 + 0.9
444,243 + 1.1
444,393 - -1.8
444,395 - 1.0
444,400 - 1.3
444,400 - 1.9
444,405 - 0.6
444,418 + -0.5
444,448 + -0.1
444,504 - -0.5
444,505 + 0.2
444,541 + -0.5
444,796 + 15292 mRNA_6924 0.15 -0.3
444,797 + 15292 mRNA_6924 0.15 0.9