Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6879

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6879: 15247 - KOG0293 WD40 repeat-containing protein, at 339326 to 341674 15247 mRNA_6880: 15248 - K00641 metX homoserine O-acetyltransferase, at 342593 to 344205 15248

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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338,375 - 2.2
338,453 - 0.2
338,617 - 1.6
338,641 - -0.1
338,654 - 0.4
338,971 - -0.4
339,224 + 0.4
339,566 + 15247 mRNA_6879 0.10 0.3
339,674 + 15247 mRNA_6879 0.15 1.4
339,816 - 15247 mRNA_6879 0.21 1.7
340,179 - 15247 mRNA_6879 0.36 -0.9
340,301 - 15247 mRNA_6879 0.42 0.1
340,412 - 15247 mRNA_6879 0.46 0.3
340,830 - 15247 mRNA_6879 0.64 -0.5
341,164 - 15247 mRNA_6879 0.78 1.8
341,289 + 15247 mRNA_6879 0.84 0.0
341,413 - 15247 mRNA_6879 0.89 2.0
341,444 + 1.8
341,596 + 0.9
341,607 - -0.9
341,730 - 0.1
341,741 + 0.5
341,752 - 0.8
341,756 + 0.5
341,904 + -0.5
342,053 + 1.3
342,058 + 1.4
342,188 - 1.8
342,188 - -1.2
342,195 + -0.1
342,198 - 0.5
342,211 + 1.6
342,233 + 0.3
342,347 + -0.4
342,347 + 1.4
342,357 - -0.6
342,361 - -0.7
342,371 + -0.9
342,508 - 0.2
342,533 + 1.7
342,636 - -1.5
342,660 + -0.0