Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6852

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6852: 15220 - KOG1337 N-methyltransferase, at 277485 to 279463 15220 mRNA_6853: 15221 - Interpro Altered inheritance of mitochondria 5, at 279894 to 280567 15221

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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276,506 - 0.1
276,515 + 1.4
276,525 - 0.4
276,615 - -1.4
276,639 - 0.6
276,952 + 0.9
277,098 + 1.6
277,105 + 0.4
277,112 + -1.3
277,121 - -2.3
277,267 - -0.7
277,404 + -0.1
277,447 + 1.3
277,447 + -0.0
277,579 - -0.6
277,735 - 15220 mRNA_6852 0.13 0.6
277,743 - 15220 mRNA_6852 0.13 -0.5
278,006 + 15220 mRNA_6852 0.26 1.5
278,388 + 15220 mRNA_6852 0.46 0.1
278,391 - 15220 mRNA_6852 0.46 1.3
279,322 + 1.9
279,323 - 1.1
279,460 + 0.7
279,629 - -1.2
279,750 - 0.8
280,076 + 15221 mRNA_6853 0.27 1.0
280,083 - 15221 mRNA_6853 0.28 0.4
280,325 - 15221 mRNA_6853 0.64 -0.9
280,326 - 15221 mRNA_6853 0.64 -0.6
280,328 - 15221 mRNA_6853 0.64 -0.3
280,344 + 15221 mRNA_6853 0.67 1.4
280,433 - 15221 mRNA_6853 0.80 1.4