Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6759

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6758: 15126 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 73895 to 75434 15126 mRNA_6759: 15127 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 75828 to 77290 15127 mRNA_6760: 15128 - Hypothetical Protein, at 77632 to 78666 15128

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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74,896 + 15126 mRNA_6758 0.65 0.3
75,284 - 1.0
75,313 + 0.5
75,316 - -0.9
75,460 + 0.2
75,463 - -0.1
75,695 - -0.1
75,742 - -1.2
75,751 + 0.1
75,751 - 1.0
75,770 + 0.2
75,907 - -0.8
75,915 + 1.0
76,065 + 15127 mRNA_6759 0.16 -0.3
76,087 - 15127 mRNA_6759 0.18 1.8
76,105 + 15127 mRNA_6759 0.19 0.2
76,158 + 15127 mRNA_6759 0.23 1.2
76,192 - 15127 mRNA_6759 0.25 0.1
76,207 + 15127 mRNA_6759 0.26 -0.7
76,224 - 15127 mRNA_6759 0.27 -0.8
76,507 - 15127 mRNA_6759 0.46 0.1
76,706 - 15127 mRNA_6759 0.60 1.4
76,761 + 15127 mRNA_6759 0.64 -0.1
76,923 - 15127 mRNA_6759 0.75 0.1
76,971 - 15127 mRNA_6759 0.78 -0.6
77,065 - 15127 mRNA_6759 0.85 -0.1
77,216 + 0.6
77,217 + 1.5
77,349 - 0.2
77,532 - 0.3
77,545 - -2.0
77,548 + 1.0
77,557 + 2.1
77,566 - -0.2
77,613 + 1.1
77,733 - -0.5
77,734 + 0.7