Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6752

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6751: 15119 - K10578 UBE2J1, NCUBE1, UBC6 ubiquitin-conjugating enzyme E2 J1, at 57250 to 58945 15119 mRNA_6752: 15120 - Hypothetical Protein, at 59165 to 59914 15120

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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58,173 - 15119 mRNA_6751 0.54 0.1
58,771 + 15119 mRNA_6751 0.90 1.0
59,132 - 2.7
59,529 + 15120 mRNA_6752 0.49 0.6
59,542 + 15120 mRNA_6752 0.50 -0.4
59,655 - 15120 mRNA_6752 0.65 0.7
59,676 + 15120 mRNA_6752 0.68 1.1
59,792 - 15120 mRNA_6752 0.84 1.4
59,814 - 15120 mRNA_6752 0.87 1.2
59,850 - 0.1
59,941 + 0.8
59,947 + 2.1
59,980 + 0.9
60,153 - 1.1
60,231 - 1.9
60,270 + 0.1
60,544 - 0.2
60,545 + -0.4
60,572 + 0.3
60,682 + 0.9
60,805 - 0.5
60,856 - -0.3
60,867 + 0.8