Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6749

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6748: 15116 - Hypothetical Protein, at 52794 to 54250 15116 mRNA_6749: 15117 - Hypothetical Protein, at 54204 to 55988 15117 mRNA_6750: 15118 - SUPERFAMILY--SSF47473, at 56227 to 57172 15118

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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53,405 + 15116 mRNA_6748 0.42 -0.1
53,511 - 15116 mRNA_6748 0.49 0.9
53,538 - 15116 mRNA_6748 0.51 -0.1
53,654 + 15116 mRNA_6748 0.59 -0.2
53,697 - 15116 mRNA_6748 0.62 -0.4
53,769 - 15116 mRNA_6748 0.67 -0.2
53,815 + 15116 mRNA_6748 0.70 0.2
53,974 + 15116 mRNA_6748 0.81 -0.2
54,061 - 15116 mRNA_6748 0.87 1.0
54,153 + 0.5
54,245 + -0.8
54,249 + 0.3
54,266 - 0.3
54,269 + 0.8
54,328 - 0.1
54,398 - 15117 mRNA_6749 0.11 -0.1
54,415 + 15117 mRNA_6749 0.12 -0.1
54,420 + 15117 mRNA_6749 0.12 -0.3
54,427 - 15117 mRNA_6749 0.12 -0.1
54,430 + 15117 mRNA_6749 0.13 -0.7
54,636 + 15117 mRNA_6749 0.24 -1.4
54,873 - 15117 mRNA_6749 0.37 -0.4
54,981 - 15117 mRNA_6749 0.44 -0.2
55,030 + 15117 mRNA_6749 0.46 -0.1
55,033 - 15117 mRNA_6749 0.46 -1.9
55,094 - 15117 mRNA_6749 0.50 1.4
55,135 - 15117 mRNA_6749 0.52 0.2
55,248 - 15117 mRNA_6749 0.58 2.3
55,265 + 15117 mRNA_6749 0.59 0.2
55,366 + 15117 mRNA_6749 0.65 2.0
55,377 + 15117 mRNA_6749 0.66 1.3
55,411 - 15117 mRNA_6749 0.68 0.3
55,418 + 15117 mRNA_6749 0.68 -1.1
55,684 + 15117 mRNA_6749 0.83 -1.2
55,702 + 15117 mRNA_6749 0.84 -0.2
55,734 - 15117 mRNA_6749 0.86 -0.7
55,741 - 15117 mRNA_6749 0.86 -1.2
55,797 + 15117 mRNA_6749 0.89 0.3
55,847 + 0.9
55,883 + -1.4
55,973 - 0.5
55,979 - 0.9
55,988 - 0.4
55,988 - 1.7
55,993 + -0.2
56,081 + -0.8
56,130 - 0.1
56,133 + 1.6
56,135 - 1.0
56,257 - 2.2
56,312 + 1.7
56,430 + 15118 mRNA_6750 0.21 0.9
56,442 + 15118 mRNA_6750 0.23 1.1
56,445 - 15118 mRNA_6750 0.23 -0.3
56,570 - 15118 mRNA_6750 0.36 -0.9
56,576 - 15118 mRNA_6750 0.37 -0.1
56,586 + 15118 mRNA_6750 0.38 0.6
56,588 + 15118 mRNA_6750 0.38 -0.3
56,589 + 15118 mRNA_6750 0.38 0.0
56,606 + 15118 mRNA_6750 0.40 1.2
56,627 + 15118 mRNA_6750 0.42 1.0
56,713 - 15118 mRNA_6750 0.51 0.7