Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6748

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6747: 15115 - Hypothetical Protein, at 50840 to 52306 15115 mRNA_6748: 15116 - Hypothetical Protein, at 52794 to 54250 15116 mRNA_6749: 15117 - Hypothetical Protein, at 54204 to 55988 15117

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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52,031 + 15115 mRNA_6747 0.81 -1.0
52,236 + 1.9
52,262 - 0.4
52,360 + 1.0
52,381 + -0.1
52,493 - 0.8
52,496 + 0.7
52,517 + 0.5
52,660 + -0.2
52,665 + 1.1
52,667 - 0.7
52,776 - 0.6
52,806 + 0.6
52,889 - 0.4
52,936 - 0.1
53,065 - 15116 mRNA_6748 0.19 0.4
53,090 + 15116 mRNA_6748 0.20 1.1
53,405 + 15116 mRNA_6748 0.42 -0.1
53,511 - 15116 mRNA_6748 0.49 0.9
53,538 - 15116 mRNA_6748 0.51 -0.1
53,654 + 15116 mRNA_6748 0.59 -0.2
53,697 - 15116 mRNA_6748 0.62 -0.4
53,769 - 15116 mRNA_6748 0.67 -0.2
53,815 + 15116 mRNA_6748 0.70 0.2
53,974 + 15116 mRNA_6748 0.81 -0.2
54,061 - 15116 mRNA_6748 0.87 1.0
54,153 + 0.5
54,245 + -0.8
54,249 + 0.3
54,266 - 0.3
54,269 + 0.8
54,328 - 0.1
54,398 - 15117 mRNA_6749 0.11 -0.1
54,415 + 15117 mRNA_6749 0.12 -0.1
54,420 + 15117 mRNA_6749 0.12 -0.3
54,427 - 15117 mRNA_6749 0.12 -0.1
54,430 + 15117 mRNA_6749 0.13 -0.7
54,636 + 15117 mRNA_6749 0.24 -1.4
54,873 - 15117 mRNA_6749 0.37 -0.4
54,981 - 15117 mRNA_6749 0.44 -0.2
55,030 + 15117 mRNA_6749 0.46 -0.1
55,033 - 15117 mRNA_6749 0.46 -1.9
55,094 - 15117 mRNA_6749 0.50 1.4
55,135 - 15117 mRNA_6749 0.52 0.2
55,248 - 15117 mRNA_6749 0.58 2.3