Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6713

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6712: 15080 - Hypothetical Protein, at 1515037 to 1516123 15080 mRNA_6713: 15081 - HMMPfam-RTA1 like protein-PF04479, at 1516568 to 1518041 15081 mRNA_6714: 15082 - HMMPfam-Inhibitor of Apoptosis domain-PF00653,ProSiteProfiles-BIR repeat profile.-PS50143,SMART-Baculoviral inhibition of apoptosis protein repeat-SM00238,SUPERFAMILY--SSF57924, at 1518971 to 1519735 15082

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,515,680 + 15080 mRNA_6712 0.59 1.3
1,515,974 - 15080 mRNA_6712 0.86 -0.7
1,515,984 + 15080 mRNA_6712 0.87 -1.4
1,516,287 + -0.1
1,516,585 - 1.1
1,516,718 + 15081 mRNA_6713 0.10 0.8
1,516,746 + 15081 mRNA_6713 0.12 0.1
1,517,053 + 15081 mRNA_6713 0.33 3.1
1,517,181 - 15081 mRNA_6713 0.42 -0.3
1,517,198 - 15081 mRNA_6713 0.43 1.0
1,517,476 + 15081 mRNA_6713 0.62 0.1
1,517,622 - 15081 mRNA_6713 0.72 0.3
1,517,678 - 15081 mRNA_6713 0.75 0.3
1,517,795 + 15081 mRNA_6713 0.83 0.1
1,517,909 - -1.6
1,518,182 - -0.6
1,518,331 + 0.9
1,518,332 - -1.3
1,518,379 - 1.3
1,518,455 + -0.3
1,518,505 + -0.4
1,518,508 - -0.1
1,518,508 - 2.4
1,518,508 - -0.1
1,518,509 + 0.3
1,518,519 - 0.6
1,518,631 - -1.2
1,518,634 - 2.0
1,518,638 - -1.0
1,518,651 + -0.4
1,518,662 + 2.2
1,518,664 - 0.7
1,518,675 + -0.2
1,518,684 - 0.3
1,518,685 + 0.5