Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6706

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6706: 15074 - K16261 YAT yeast amino acid transporter, at 1497015 to 1499228 15074 mRNA_6707: 15075 - KOG3750 Inositol phospholipid synthesis protein, Scs3p, at 1499428 to 1503895 15075

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,496,017 - 0.2
1,496,041 + 1.4
1,496,058 + -0.7
1,496,059 - -0.6
1,496,083 - -0.8
1,496,099 - 0.2
1,496,104 - 1.2
1,496,215 + -0.4
1,496,227 - -1.3
1,496,288 - 1.4
1,496,360 + -0.6
1,496,360 - 1.2
1,496,373 + 0.7
1,496,376 - -0.1
1,496,378 + 0.0
1,496,382 + -0.3
1,496,395 - 0.6
1,496,396 - 1.3
1,496,398 + 1.5
1,496,402 - 1.6
1,496,455 - -1.2
1,496,518 - 1.8
1,496,543 - 2.2
1,496,543 - 0.0
1,496,563 + 1.0
1,496,949 + -0.1
1,496,985 - -0.9
1,497,001 + 0.8
1,497,127 - 0.5
1,497,502 - 15074 mRNA_6706 0.22 0.9
1,497,576 + 15074 mRNA_6706 0.25 0.3
1,497,590 + 15074 mRNA_6706 0.26 1.7
1,497,803 + 15074 mRNA_6706 0.36 0.3
1,497,822 - 15074 mRNA_6706 0.36 0.8
1,498,764 - 15074 mRNA_6706 0.79 1.5
1,499,331 - 0.6
1,499,337 - 0.4
1,499,507 - -0.9
1,499,642 + -0.4
1,499,650 + -0.1