Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6649

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6648: 15016 - BLAST Gluconolactonase [Termitomyces sp. J132], at 1342998 to 1344316 15016 mRNA_6649: 15017 - K12580 CNOT3, NOT3 CCR4-NOT transcription complex subunit 3, at 1344681 to 1347468 15017 mRNA_6650: 15018 - HMMPfam-Domain of unknown function (DUF1772)-PF08592, at 1348081 to 1348867 15018

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,344,131 - 15016 mRNA_6648 0.86 1.1
1,344,434 - 2.9
1,344,440 - 0.9
1,344,442 - -0.5
1,344,573 - 1.5
1,344,574 + 1.3
1,344,576 - -1.3
1,345,170 - 15017 mRNA_6649 0.18 0.8
1,347,278 + 2.1
1,347,503 - 0.1
1,347,798 - -0.1
1,347,836 - -0.3
1,347,986 - 0.9
1,347,989 - 0.0
1,348,090 - 0.6
1,348,131 + -0.1