Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6616

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6615: 14983 - Hypothetical Protein, at 1254532 to 1256049 14983 mRNA_6616: 14984 - Hypothetical Protein, at 1256370 to 1257792 14984 mRNA_6617: 14985 - K15544 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72, at 1258032 to 1259206 14985

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,255,435 - 14983 mRNA_6615 0.59 -0.8
1,255,833 + 14983 mRNA_6615 0.86 0.6
1,255,987 - 0.8
1,255,987 - 2.3
1,255,988 + -0.2
1,256,018 - 0.3
1,256,170 - -0.8
1,256,177 + -0.4
1,256,186 + -0.4
1,256,191 + -0.6
1,256,347 - -0.4
1,256,354 + 1.3
1,256,622 - 14984 mRNA_6616 0.18 -0.6
1,256,677 + 14984 mRNA_6616 0.22 0.7
1,256,793 - 14984 mRNA_6616 0.30 1.6
1,257,230 - 14984 mRNA_6616 0.60 -1.0
1,257,514 + 14984 mRNA_6616 0.80 0.6
1,257,524 + 14984 mRNA_6616 0.81 -0.3
1,257,806 + -0.5
1,257,958 - -0.1
1,257,974 + -0.8
1,257,977 + -0.3
1,258,114 + -0.6
1,258,213 - 14985 mRNA_6617 0.15 0.2
1,258,640 - 14985 mRNA_6617 0.52 1.4