Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6586

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6585: 14953 - K14850 RRP8 ribosomal RNA-processing protein 8, at 1161418 to 1162965 14953 mRNA_6586: 14954 - SUPERFAMILY--SSF55729, at 1163185 to 1164579 14954

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,162,234 - 14953 mRNA_6585 0.53 2.6
1,162,420 + 14953 mRNA_6585 0.65 1.5
1,162,667 - 14953 mRNA_6585 0.81 -1.0
1,162,674 - 14953 mRNA_6585 0.81 0.4
1,162,828 + 0.1
1,162,878 + 0.6
1,162,960 + -1.2
1,162,994 + -0.1
1,162,999 - 2.3
1,163,065 - 0.5
1,163,074 - 1.1
1,163,085 - 1.3
1,163,090 - 0.6
1,163,091 + -0.1
1,163,093 - -0.0
1,163,109 + -0.9
1,163,113 - 0.8
1,163,116 + 0.6
1,163,116 - -0.6
1,163,117 + 1.3
1,163,119 - 1.7
1,163,396 - 14954 mRNA_6586 0.15 0.4
1,163,404 + 14954 mRNA_6586 0.16 -0.1
1,163,412 + 14954 mRNA_6586 0.16 0.5
1,163,416 - 14954 mRNA_6586 0.17 0.2
1,163,533 + 14954 mRNA_6586 0.25 -0.7
1,163,855 + 14954 mRNA_6586 0.48 0.1
1,164,107 - 14954 mRNA_6586 0.66 -0.2
1,164,481 - -1.9
1,164,584 + 0.2
1,164,961 - 0.4
1,165,047 + -0.6
1,165,175 + 0.3
1,165,178 - -0.4
1,165,293 - 0.0
1,165,305 - -0.2
1,165,307 + 0.2
1,165,316 - 0.2
1,165,325 - 0.4
1,165,328 + 0.1
1,165,330 + 1.1
1,165,330 + 0.9
1,165,333 - 0.8
1,165,336 + 0.1
1,165,339 + -0.3
1,165,342 - -0.7
1,165,344 - -0.3
1,165,347 + 3.2
1,165,356 + 0.2
1,165,362 - 1.0
1,165,363 + -1.2
1,165,365 - 0.1
1,165,365 + -0.3
1,165,374 - 0.7
1,165,378 + -0.8
1,165,380 + -1.6
1,165,382 - -0.4
1,165,386 - 0.8
1,165,387 - -0.1
1,165,400 + -0.9
1,165,418 + 0.9
1,165,432 + 0.3
1,165,433 + -0.4
1,165,440 - 1.2
1,165,462 + -0.1
1,165,470 + -0.4
1,165,472 - -0.2
1,165,491 - -1.2
1,165,512 + -0.4
1,165,522 + 0.1
1,165,524 + 1.1
1,165,528 - 1.1
1,165,529 - -0.6
1,165,532 - 0.8
1,165,539 + 0.6
1,165,547 - 0.1
1,165,558 + -0.4