Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6504

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6503: 14871 - K11360 SPT8 transcriptional activator SPT8, at 939011 to 940996 14871 mRNA_6504: 14872 - Hypothetical Protein, at 941388 to 943563 14872 mRNA_6505: 14873 - Hypothetical Protein, at 943993 to 944857 14873

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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940,409 - 14871 mRNA_6503 0.70 0.2
940,415 - 14871 mRNA_6503 0.71 0.9
940,962 + -0.4
940,964 - -0.4
940,998 - -0.8
941,008 + 0.4
941,083 - 0.1
941,085 - -0.7
941,087 - 0.2
941,134 - -0.8
941,140 - -1.4
941,149 + 0.3
941,159 + -1.4
941,159 + -0.5
941,180 - -1.8
941,266 + -0.6
941,284 + -0.0
941,290 + 0.2
941,318 + 0.1
941,430 - -0.2
941,467 - 1.5
941,501 + 0.9
941,603 - 0.5
941,708 + 14872 mRNA_6504 0.15 -1.0
941,773 + 14872 mRNA_6504 0.18 0.9
942,095 - 14872 mRNA_6504 0.32 1.6
942,217 + 14872 mRNA_6504 0.38 -0.1
942,363 + 14872 mRNA_6504 0.45 -1.1
942,470 + 14872 mRNA_6504 0.50 0.7
942,474 - 14872 mRNA_6504 0.50 0.1
942,889 - 14872 mRNA_6504 0.69 0.7
942,896 + 14872 mRNA_6504 0.69 3.7
942,930 - 14872 mRNA_6504 0.71 -0.6
943,606 + 1.1
944,075 - 0.6
944,331 + 14873 mRNA_6505 0.39 -0.3
944,486 - 14873 mRNA_6505 0.57 2.1
944,490 - 14873 mRNA_6505 0.57 -1.4
944,511 - 14873 mRNA_6505 0.60 -0.0