Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6471

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6470: 14838 - Hypothetical Protein, at 864745 to 865870 14838 mRNA_6471: 14839 - KOG0806 Carbon-nitrogen hydrolase, at 866226 to 867912 14839 mRNA_6472: 14840 - Hypothetical Protein, at 868009 to 868986 14840

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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865,302 - 14838 mRNA_6470 0.49 2.0
865,573 - 14838 mRNA_6470 0.74 -0.2
865,664 + 14838 mRNA_6470 0.82 1.0
865,695 + 14838 mRNA_6470 0.84 1.9
865,760 + 1.4
865,873 + 0.4
866,120 - -0.1
866,129 - 0.8
866,143 - 0.9
866,179 - 0.1
866,273 - 1.6
866,341 + 0.9
866,343 - 0.9
866,344 + 0.6
866,431 + 14839 mRNA_6471 0.12 -0.4
866,438 - 14839 mRNA_6471 0.13 0.4
866,438 - 14839 mRNA_6471 0.13 1.5
866,469 + 14839 mRNA_6471 0.14 0.1
866,608 + 14839 mRNA_6471 0.23 -1.2
866,752 - 14839 mRNA_6471 0.31 1.5
866,769 + 14839 mRNA_6471 0.32 0.4
867,029 - 14839 mRNA_6471 0.48 -1.0
867,626 - 14839 mRNA_6471 0.83 -0.1
867,637 + 14839 mRNA_6471 0.84 0.6
867,693 + 14839 mRNA_6471 0.87 0.3
868,035 + 1.1
868,248 - 14840 mRNA_6472 0.24 -0.3
868,387 - 14840 mRNA_6472 0.39 0.2
868,461 + 14840 mRNA_6472 0.46 -0.2
868,470 - 14840 mRNA_6472 0.47 2.3
868,794 - 14840 mRNA_6472 0.80 0.2
868,894 - 1.3