Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6462

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6461: 14829 - Hypothetical Protein, at 839860 to 840668 14829 mRNA_6462: 14830 - Hypothetical Protein, at 841156 to 842746 14830

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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840,278 - 14829 mRNA_6461 0.52 -0.1
840,303 - 14829 mRNA_6461 0.55 -0.8
840,312 + 14829 mRNA_6461 0.56 1.7
840,313 - 14829 mRNA_6461 0.56 0.1
840,442 - 14829 mRNA_6461 0.72 0.1
840,455 + 14829 mRNA_6461 0.74 -0.2
840,695 + -1.0
840,756 + 0.2
840,857 - 0.1
840,908 - -0.7
840,913 + 1.6
841,029 - 0.0
841,132 - -0.2
841,194 + 0.2
841,197 + -0.0
841,329 + 14830 mRNA_6462 0.11 -0.6
841,491 + 14830 mRNA_6462 0.21 -2.2
841,631 + 14830 mRNA_6462 0.30 -0.1
841,986 - 14830 mRNA_6462 0.52 0.8
842,083 - 14830 mRNA_6462 0.58 -0.0
842,193 + 14830 mRNA_6462 0.65 0.1
842,367 + 14830 mRNA_6462 0.76 0.2
842,478 - 14830 mRNA_6462 0.83 1.2
842,925 - 0.8
842,927 - -0.3
842,940 - -0.9
842,948 + 1.1
843,066 - 0.7
843,218 + -0.8
843,355 + -0.1
843,514 + 0.0
843,515 + 1.6
843,515 + 0.1
843,523 - -0.4
843,534 - -2.1
843,539 - 0.9
843,670 + 0.9
843,685 + 0.1
843,685 + -0.7