Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6419

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6418: 14786 - K02127 ATPeF0B, ATP5F1, ATP4 F-type H+-transporting ATPase subunit b, at 760341 to 761286 14786 mRNA_6419: 14787 - KOG0744 AAA+-type ATPase, at 761703 to 763959 14787 mRNA_6420: 14788 - K14263 BNA7 kynurenine formamidase, at 764043 to 765055 14788

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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761,322 - 1.4
761,531 + 0.1
761,633 + 0.4
761,662 - -0.2
761,775 + 1.3
761,814 - 1.0
762,180 - 14787 mRNA_6419 0.21 0.9
762,210 + 14787 mRNA_6419 0.22 -0.5
762,269 + 14787 mRNA_6419 0.25 2.0
762,341 - 14787 mRNA_6419 0.28 -0.5
762,637 - 14787 mRNA_6419 0.41 -0.3
763,378 + 14787 mRNA_6419 0.74 -0.6
763,897 + 1.6
763,981 + -0.8
764,519 + 14788 mRNA_6420 0.47 1.2
764,569 + 14788 mRNA_6420 0.52 0.1
764,829 - 14788 mRNA_6420 0.78 0.7