Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6358

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6357: 14725 - HMMPfam-Ribonuclease-III-like-PF14622,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 625367 to 626592 14725 mRNA_6358: 14726 - KOG1674 Cyclin, at 627075 to 629360 14726

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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626,643 - 0.8
626,648 - 1.5
626,660 - 1.3
626,662 - -1.2
626,663 - 0.1
626,669 - -0.2
626,672 + 0.0
626,672 + -1.6
626,672 + 0.4
626,673 + 0.1
626,778 - 0.2
626,783 - 1.3
626,783 - -1.2
626,803 - 0.3
626,929 + 0.5
626,937 - 0.5
626,952 - 0.1
626,957 + -0.4
626,967 - -0.7
627,070 + 1.7
627,088 - 1.3
627,538 - 14726 mRNA_6358 0.20 1.1
627,565 - 14726 mRNA_6358 0.21 2.8
627,675 + 14726 mRNA_6358 0.26 -1.2
627,702 - 14726 mRNA_6358 0.27 2.3
628,175 + 14726 mRNA_6358 0.48 0.2
628,417 - 14726 mRNA_6358 0.59 -0.0
628,875 + 14726 mRNA_6358 0.79 -0.4
629,148 - 0.0
629,177 + -0.3
629,181 + 0.2
629,314 - -0.4
629,317 + -0.5
629,341 + 0.2
629,345 - 1.0
629,358 + 0.1
629,419 + 0.1
629,467 + 0.4
629,472 + 0.1
629,481 - -0.3
629,484 - -0.9
629,487 + -0.3
629,499 + -0.8
629,507 - 0.8
629,510 + -1.0
629,512 + -1.4
629,537 + 2.0
629,612 + 0.3
629,632 - 1.8
629,633 - -0.4
629,640 - -1.2
629,689 - -1.2
629,694 + -0.2
629,697 + 0.8
629,729 - 0.4
629,794 + 0.9
629,797 + -0.0
629,809 - 0.1
629,812 - -0.2
629,827 - -1.1
629,842 - 0.4
629,850 + -1.0
629,858 - -0.5
629,859 + -0.2
629,864 + 0.0
629,893 - -0.2
629,899 + 0.6
629,902 + 2.0
629,903 - -0.6
629,911 + -0.3
629,917 - -0.4
629,919 - 0.6
629,926 + 0.0
629,956 + -0.3
629,958 + 0.7
629,959 - -0.3
629,976 - 1.5
629,984 + -0.5
629,985 + 0.4
630,000 - -0.6
630,003 + 0.3
630,004 + 2.0
630,008 + 1.0
630,010 + -0.6
630,013 - 0.1
630,024 + 1.7
630,036 - -0.7
630,040 - -0.4
630,041 + 0.0
630,056 - -0.2
630,064 - 0.2
630,159 + 1.2
630,165 - 0.7
630,169 - -0.3
630,183 + 0.5
630,198 - 1.4
630,220 + 0.6
630,234 + 1.3
630,280 + -0.8
630,281 + -0.7
630,285 - -0.4
630,312 - 0.9
630,325 + -1.1
630,343 - 0.9
630,351 + -0.1
630,355 - -0.4
630,355 - 0.4