Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6303

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6302: 14670 - K12562 AMPH amphiphysin, at 478198 to 480170 14670 mRNA_6303: 14671 - HMMPfam-Uncharacterised protein family UPF0052-PF01933,SUPERFAMILY--SSF142338, at 480428 to 482328 14671 mRNA_6304: 14672 - Hypothetical Protein, at 482643 to 484084 14672

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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479,496 + 14670 mRNA_6302 0.66 1.2
479,514 + 14670 mRNA_6302 0.67 2.2
479,626 - 14670 mRNA_6302 0.72 -0.2
480,069 - -0.4
480,071 - 0.6
480,210 + 3.0
480,230 - 0.9
480,249 + -1.4
480,255 + 1.6
480,395 + 0.1
480,676 - 14671 mRNA_6303 0.13 -1.1
480,676 - 14671 mRNA_6303 0.13 -0.6
480,682 + 14671 mRNA_6303 0.13 -0.2
480,691 - 14671 mRNA_6303 0.14 1.0
480,787 - 14671 mRNA_6303 0.19 -0.2
481,538 - 14671 mRNA_6303 0.58 0.7
481,551 + 14671 mRNA_6303 0.59 1.9
481,855 - 14671 mRNA_6303 0.75 -2.1
482,110 - 14671 mRNA_6303 0.88 -0.8
482,253 - 0.4
482,386 - 0.3
482,428 - -0.3
482,431 + -0.7
482,431 + -0.5
482,451 - -0.2
482,732 + 1.0
482,753 + -0.9
483,027 + 14672 mRNA_6304 0.27 0.2
483,211 - 14672 mRNA_6304 0.39 0.2
483,288 - 14672 mRNA_6304 0.45 2.6
483,309 + 14672 mRNA_6304 0.46 1.0