Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6285

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6284: 14652 - BLAST macrofage activating glycoprotein, putative [Rhizocto..., at 440723 to 442428 14652 mRNA_6285: 14653 - K05610 UCHL5, UCH37 ubiquitin carboxyl-terminal hydrolase L5, at 442614 to 443927 14653 mRNA_6286: 14654 - HMMPfam-Protein of unknown function (DUF3128)-PF11326, at 444214 to 444568 14654

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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441,851 + 14652 mRNA_6284 0.66 -0.2
441,966 + 14652 mRNA_6284 0.73 -0.7
441,970 + 14652 mRNA_6284 0.73 1.1
442,014 + 14652 mRNA_6284 0.76 -1.2
442,155 - 14652 mRNA_6284 0.84 1.4
442,261 + -0.5
442,388 + 0.5
442,407 + -1.0
442,428 - 0.4
442,428 + 0.6
442,431 - -0.1
442,576 + 0.2
442,714 + -0.2
443,144 - 14653 mRNA_6285 0.40 -1.2
443,621 - 14653 mRNA_6285 0.77 -0.2
443,866 + 0.1
444,013 - 0.3
444,722 - 0.5
444,853 - 0.1
444,867 - 0.1
444,868 - 2.3
444,872 + 0.4