Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6241

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6241: 14609 - Hypothetical Protein, at 333735 to 334704 14609 mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335352 to 337546 14610

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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332,817 - 1.0
332,910 - 1.3
333,145 + 0.1
333,148 - -1.3
333,174 + 1.0
333,260 + 0.4
333,304 - -0.3
333,305 + 1.0
333,315 + -0.2
333,342 - 1.2
333,344 - 0.4
333,354 - 0.3
333,356 + 0.4
333,436 - 0.1
333,469 - -1.6
333,495 + 1.0
333,508 + -0.2
333,557 + 0.2
333,565 + -0.1
333,573 - -0.1
333,578 - 0.9
333,580 - 0.3
333,584 - 1.3
333,590 - -0.2
333,592 - 0.8
333,594 - 0.3
333,600 - -0.1
333,602 + 2.0
333,604 + -0.4
333,606 + -0.0
333,607 + -0.3
333,613 - 1.7
333,619 - 0.4
333,623 - 0.7
333,629 + -0.3
333,629 + 0.2
333,629 + 1.5
333,633 - -0.5
333,643 - -0.4
333,646 + -0.1
333,771 - 0.5
333,772 - 1.7
333,782 - 0.3
333,800 + 0.5
333,808 - 0.0
333,951 - 14609 mRNA_6241 0.22 -0.8
333,961 + 14609 mRNA_6241 0.23 0.1
333,963 + 14609 mRNA_6241 0.24 0.7
333,976 - 14609 mRNA_6241 0.25 -1.6
334,089 + 14609 mRNA_6241 0.36 -0.5
334,104 - 14609 mRNA_6241 0.38 -0.2
334,114 + 14609 mRNA_6241 0.39 1.3
334,261 + 14609 mRNA_6241 0.54 0.7
334,402 + 14609 mRNA_6241 0.69 0.2
334,534 - 14609 mRNA_6241 0.82 -0.6
334,682 + -0.7
334,682 - 0.5
334,705 + -0.7
334,938 + 0.1
335,105 - -0.4
335,214 + 1.1
335,268 - 1.0
335,289 - 1.4
335,292 + 1.7
335,384 + -0.5
335,432 - -1.6
335,433 + 0.5
335,494 + 0.2
335,574 - 14610 mRNA_6242 0.10 0.1
335,597 + 14610 mRNA_6242 0.11 0.3