Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6221

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6220: 14588 - Hypothetical Protein, at 282563 to 283196 14588 mRNA_6221: 14589 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SMART-Broad-Complex, Tramtrack and Bric a brac-SM00225,SUPERFAMILY--SSF54695, at 283422 to 285141 14589 mRNA_6222: 14590 - K07088 K07088 uncharacterized protein, at 285427 to 287812 14590

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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282,448 + -1.5
282,450 - 0.3
282,455 - 0.5
282,457 + -0.0
282,459 - -0.5
282,503 - 0.1
282,812 + 14588 mRNA_6220 0.39 0.9
283,116 - 14588 mRNA_6220 0.87 1.9
284,113 - 14589 mRNA_6221 0.40 -0.4
284,283 - 14589 mRNA_6221 0.50 -1.0
284,527 - 14589 mRNA_6221 0.64 -0.3
284,601 + 14589 mRNA_6221 0.69 0.8
284,701 + 14589 mRNA_6221 0.74 0.1
284,849 + 14589 mRNA_6221 0.83 0.4
284,973 - -0.0
285,293 - 0.2
285,310 - 2.2
285,458 - -0.3