Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6190

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6189: 14557 - ProSiteProfiles-Tyrosine specific protein phosphatases family profile.-PS50056,SUPERFAMILY--SSF52799, at 212357 to 214481 14557 mRNA_6190: 14558 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 215040 to 217246 14558 mRNA_6191: 14559 - K01485 codA cytosine deaminase, at 218019 to 218832 14559

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
214,103 + 14557 mRNA_6189 0.82 0.6
214,568 + -0.9
214,607 + 0.3
214,702 - -0.5
214,719 + 0.4
214,726 - -0.0
214,733 + 1.6
214,889 - 2.2
214,906 - 0.1
215,201 + 1.5
215,596 + 14558 mRNA_6190 0.25 -0.2
215,619 + 14558 mRNA_6190 0.26 -0.2
215,755 - 14558 mRNA_6190 0.32 -0.1
215,816 + 14558 mRNA_6190 0.35 0.1
216,017 + 14558 mRNA_6190 0.44 -0.9
216,042 + 14558 mRNA_6190 0.45 0.3
216,190 - 14558 mRNA_6190 0.52 -0.2
216,331 - 14558 mRNA_6190 0.58 -0.5
216,335 - 14558 mRNA_6190 0.59 -0.1
216,752 - 14558 mRNA_6190 0.78 -0.1
216,782 + 14558 mRNA_6190 0.79 -1.0
216,937 + 14558 mRNA_6190 0.86 0.3
217,049 - -0.2
217,056 + -0.7
217,057 + 0.1
217,058 - 1.1
217,065 - -0.5
217,071 + -0.9
217,209 + 0.3
217,210 + -0.2
217,220 + -0.3
217,236 - -0.5
217,345 - -0.5
217,351 - -1.0
217,352 + -0.1
217,352 - -0.4
217,363 - -0.2
217,363 - -0.1
217,365 - 0.4
217,366 + -0.8
217,367 - -0.0
217,369 - -0.7
217,370 + -0.1
217,372 - -1.4
217,372 + 0.3
217,372 - 0.6
217,383 + 0.6
217,385 + -0.1
217,390 - 1.5
217,391 + 1.8
217,392 + -0.2
217,392 + 0.9
217,396 - 0.0
217,398 - 0.4
217,408 + 0.5
217,429 - 1.7
217,441 + -0.0
217,460 - 0.5
217,465 + -0.7
217,488 + -1.2
217,549 - -1.1
217,572 + 1.4
217,575 - -0.2
217,594 - 0.1
217,605 + 0.3
217,620 + -0.3
217,623 - -1.3
217,625 - -0.5
217,626 + -0.1
217,628 - 1.5
217,630 - -0.0
217,631 + -0.5
217,633 + 0.2
217,634 + 1.7
217,638 - 1.4
217,639 - -0.4
217,646 - -1.9
217,653 + 3.5
217,655 + -0.7
217,662 - -0.4
217,677 - 0.0
217,694 - 1.1
217,695 + -1.6
217,696 + -0.6
217,706 + 1.0
217,707 + 0.6
217,721 + -0.2
217,739 + 0.7
217,750 + 0.7
217,772 + -0.1
217,777 + 2.7
217,778 + 0.9
217,787 + 0.1
217,801 + 1.2
217,801 + 0.1
217,808 + -0.9
217,818 + -0.4
217,822 - -0.3
217,823 + -0.7
217,823 - -0.2
217,824 + -0.6
217,825 - 0.2
217,825 - -0.3
217,825 + 0.8
217,832 + 1.6
217,833 + -0.5
217,835 + 0.3
217,837 + -1.6
217,841 + 0.4
217,842 + 0.3
217,848 - 0.5
217,851 + 1.2
217,855 - -0.2
217,859 + 0.4
217,874 + 0.2
217,985 + -0.1
217,995 + -0.7
218,006 + -0.5
218,011 - -0.1
218,152 + 14559 mRNA_6191 0.16 0.1
218,164 + 14559 mRNA_6191 0.18 -1.4