Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6112

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6111: 14479 - Hypothetical Protein, at 16061 to 17629 14479 mRNA_6112: 14480 - K01785 galM, GALM aldose 1-epimerase, at 17714 to 19844 14480 mRNA_6113: 14481 - K17263 CAND1 cullin-associated NEDD8-dissociated protein 1, at 19972 to 24805 14481

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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16,719 + 14479 mRNA_6111 0.42 2.0
16,817 + 14479 mRNA_6111 0.48 1.5
16,983 - 14479 mRNA_6111 0.59 -0.1
17,034 + 14479 mRNA_6111 0.62 0.1
17,141 + 14479 mRNA_6111 0.69 -0.5
17,177 - 14479 mRNA_6111 0.71 -0.4
17,181 + 14479 mRNA_6111 0.71 1.9
17,236 + 14479 mRNA_6111 0.75 -0.9
17,259 + 14479 mRNA_6111 0.76 -0.4
17,567 + -2.5
17,865 - 0.5
18,020 - 14480 mRNA_6112 0.14 0.2
18,077 + 14480 mRNA_6112 0.17 2.1
18,276 + 14480 mRNA_6112 0.26 -0.1
18,462 + 14480 mRNA_6112 0.35 -0.9
18,464 - 14480 mRNA_6112 0.35 -0.5
18,586 + 14480 mRNA_6112 0.41 -0.3
18,589 - 14480 mRNA_6112 0.41 1.8
18,596 + 14480 mRNA_6112 0.41 1.1
18,598 - 14480 mRNA_6112 0.41 -0.5
18,812 + 14480 mRNA_6112 0.52 0.0
18,864 - 14480 mRNA_6112 0.54 0.5
19,160 + 14480 mRNA_6112 0.68 1.4
19,160 + 14480 mRNA_6112 0.68 1.0
19,242 + 14480 mRNA_6112 0.72 -0.2
19,332 - 14480 mRNA_6112 0.76 0.2
19,368 + 14480 mRNA_6112 0.78 1.5
19,396 + 14480 mRNA_6112 0.79 0.9
19,505 + 14480 mRNA_6112 0.84 1.6
19,511 + 14480 mRNA_6112 0.84 2.4
19,589 - 14480 mRNA_6112 0.88 0.7
19,615 - 14480 mRNA_6112 0.89 0.2
19,762 - -1.0
19,763 + 1.7
19,767 - 0.2
19,778 - 1.0
19,789 + 0.7
19,796 + -0.2
19,916 - 0.7
19,922 + -0.1
19,926 + 0.1
19,930 + -0.0
19,932 + -0.0
19,946 + 1.7
20,080 + 0.5
20,205 - -0.6
20,470 + 14481 mRNA_6113 0.10 1.3
20,606 - 14481 mRNA_6113 0.13 0.1
20,828 - 14481 mRNA_6113 0.18 1.0