Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6111

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6110: 14478 - Hypothetical Protein, at 15067 to 15769 14478 mRNA_6111: 14479 - Hypothetical Protein, at 16061 to 17629 14479 mRNA_6112: 14480 - K01785 galM, GALM aldose 1-epimerase, at 17714 to 19844 14480

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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15,116 - 0.9
15,117 + 0.5
15,118 + -0.2
15,130 + 0.0
15,245 - 14478 mRNA_6110 0.25 -1.8
15,256 + 14478 mRNA_6110 0.27 -1.4
15,281 - 14478 mRNA_6110 0.30 0.3
15,308 + 14478 mRNA_6110 0.34 -1.3
15,311 + 14478 mRNA_6110 0.35 0.8
15,544 - 14478 mRNA_6110 0.68 0.0
15,693 - 14478 mRNA_6110 0.89 -0.2
15,705 + 1.0
15,765 - 1.4
15,862 + 0.3
16,319 + 14479 mRNA_6111 0.16 -0.2
16,533 + 14479 mRNA_6111 0.30 0.6
16,535 - 14479 mRNA_6111 0.30 -0.6
16,665 + 14479 mRNA_6111 0.38 -2.3
16,681 + 14479 mRNA_6111 0.40 1.8
16,681 + 14479 mRNA_6111 0.40 1.1
16,689 + 14479 mRNA_6111 0.40 0.8
16,719 + 14479 mRNA_6111 0.42 2.0
16,817 + 14479 mRNA_6111 0.48 1.5
16,983 - 14479 mRNA_6111 0.59 -0.1
17,034 + 14479 mRNA_6111 0.62 0.1
17,141 + 14479 mRNA_6111 0.69 -0.5
17,177 - 14479 mRNA_6111 0.71 -0.4
17,181 + 14479 mRNA_6111 0.71 1.9
17,236 + 14479 mRNA_6111 0.75 -0.9
17,259 + 14479 mRNA_6111 0.76 -0.4
17,567 + -2.5
17,865 - 0.5
18,020 - 14480 mRNA_6112 0.14 0.2
18,077 + 14480 mRNA_6112 0.17 2.1
18,276 + 14480 mRNA_6112 0.26 -0.1
18,462 + 14480 mRNA_6112 0.35 -0.9
18,464 - 14480 mRNA_6112 0.35 -0.5
18,586 + 14480 mRNA_6112 0.41 -0.3
18,589 - 14480 mRNA_6112 0.41 1.8
18,596 + 14480 mRNA_6112 0.41 1.1
18,598 - 14480 mRNA_6112 0.41 -0.5