Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6057

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6056: 14424 - K13996 EPS1 protein disulfide-isomerase, at 1537539 to 1540392 14424 mRNA_6057: 14425 - Hypothetical Protein, at 1540380 to 1540856 14425 mRNA_6058: 14426 - SUPERFAMILY--SSF52047, at 1541089 to 1542626 14426

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,539,509 + 14424 mRNA_6056 0.69 0.3
1,539,796 + 14424 mRNA_6056 0.79 -0.5
1,539,854 - 14424 mRNA_6056 0.81 0.4
1,539,894 - 14424 mRNA_6056 0.83 0.5
1,539,895 - 14424 mRNA_6056 0.83 -0.8
1,539,921 + 14424 mRNA_6056 0.83 0.6
1,540,043 - 14424 mRNA_6056 0.88 0.3
1,540,143 - 0.5
1,540,186 - -1.0
1,540,191 + 0.7
1,540,301 - 0.6
1,540,353 - -0.0
1,540,481 - 14425 mRNA_6057 0.21 0.7
1,540,610 + 14425 mRNA_6057 0.48 1.5
1,540,617 + 14425 mRNA_6057 0.50 0.3
1,540,618 + 14425 mRNA_6057 0.50 -1.5
1,540,639 + 14425 mRNA_6057 0.54 1.6
1,540,765 - 14425 mRNA_6057 0.81 -0.3
1,540,963 - 1.0
1,541,105 + -1.0
1,541,113 - -0.8
1,541,190 + 0.9
1,541,371 - 14426 mRNA_6058 0.18 0.3
1,541,502 - 14426 mRNA_6058 0.27 -1.4
1,541,519 + 14426 mRNA_6058 0.28 -0.5
1,541,552 + 14426 mRNA_6058 0.30 -1.8
1,541,620 + 14426 mRNA_6058 0.35 -0.2
1,541,648 - 14426 mRNA_6058 0.36 -1.1
1,541,649 + 14426 mRNA_6058 0.36 -1.4
1,541,658 + 14426 mRNA_6058 0.37 1.0
1,541,756 - 14426 mRNA_6058 0.43 -0.5
1,541,760 + 14426 mRNA_6058 0.44 0.5