Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6042

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6041: 14409 - Hypothetical Protein, at 1502733 to 1506557 14409 mRNA_6042: 14410 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 1506787 to 1508526 14410 mRNA_6043: 14411 - Hypothetical Protein, at 1508719 to 1509973 14411

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,506,517 - 0.9
1,506,538 - 1.6
1,506,643 + 0.2
1,506,652 - 1.6
1,506,654 + 1.3
1,506,710 + -1.0
1,506,804 - -1.2
1,506,832 + -0.8
1,506,939 + 1.2
1,506,956 - -0.2
1,506,968 + 14410 mRNA_6042 0.10 -0.2
1,506,979 - 14410 mRNA_6042 0.11 0.7
1,506,999 - 14410 mRNA_6042 0.12 -0.4
1,506,999 - 14410 mRNA_6042 0.12 0.1
1,507,106 + 14410 mRNA_6042 0.18 0.0
1,507,202 - 14410 mRNA_6042 0.24 0.4
1,507,216 - 14410 mRNA_6042 0.25 0.3
1,507,255 + 14410 mRNA_6042 0.27 -1.0
1,507,282 + 14410 mRNA_6042 0.28 0.6
1,507,285 + 14410 mRNA_6042 0.29 2.3
1,507,285 - 14410 mRNA_6042 0.29 0.8
1,507,287 + 14410 mRNA_6042 0.29 -0.8
1,507,509 - 14410 mRNA_6042 0.41 0.3
1,507,518 + 14410 mRNA_6042 0.42 -0.5
1,507,518 + 14410 mRNA_6042 0.42 -0.8
1,507,521 - 14410 mRNA_6042 0.42 0.7
1,507,549 + 14410 mRNA_6042 0.44 3.0
1,507,983 + 14410 mRNA_6042 0.69 -0.8
1,508,391 - -0.9
1,508,392 + 3.5
1,508,537 - 1.0
1,508,930 + 14411 mRNA_6043 0.17 -0.4
1,508,970 - 14411 mRNA_6043 0.20 1.0
1,508,989 + 14411 mRNA_6043 0.22 0.2
1,509,352 + 14411 mRNA_6043 0.50 0.1
1,509,388 + 14411 mRNA_6043 0.53 -0.3