Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6038

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6037: 14405 - SUPERFAMILY--SSF52047, at 1495586 to 1496740 14405 mRNA_6038: 14406 - Hypothetical Protein, at 1497291 to 1498658 14406 mRNA_6039: 14407 - Interpro F-box-like, at 1498979 to 1500418 14407

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,496,322 - 14405 mRNA_6037 0.64 -0.5
1,496,433 - 14405 mRNA_6037 0.73 1.1
1,496,533 + 14405 mRNA_6037 0.82 1.6
1,496,594 - 14405 mRNA_6037 0.87 -0.1
1,496,667 - 0.7
1,497,179 + 0.2
1,497,283 - 1.7
1,497,314 + 0.3
1,497,331 - -0.6
1,497,457 - 14406 mRNA_6038 0.12 0.6
1,497,460 - 14406 mRNA_6038 0.12 0.4
1,497,703 - 14406 mRNA_6038 0.30 -0.5
1,497,908 - 14406 mRNA_6038 0.45 0.1
1,498,018 + 14406 mRNA_6038 0.53 1.3
1,498,023 - 14406 mRNA_6038 0.54 -0.3
1,498,068 + 14406 mRNA_6038 0.57 0.3
1,498,163 + 14406 mRNA_6038 0.64 1.3
1,498,190 + 14406 mRNA_6038 0.66 -0.3
1,498,194 - 14406 mRNA_6038 0.66 -2.1
1,498,304 - 14406 mRNA_6038 0.74 1.4
1,498,561 + 0.4
1,498,569 - -0.1
1,498,579 - 0.4
1,498,614 - 0.9
1,498,661 + -1.0
1,498,757 - 2.3
1,498,782 + 0.7
1,498,785 - -0.5
1,498,881 + -0.2
1,498,962 + 0.3
1,499,007 - 1.1
1,499,200 + 14407 mRNA_6039 0.15 -0.5
1,499,211 - 14407 mRNA_6039 0.16 -1.2
1,499,219 - 14407 mRNA_6039 0.17 0.1
1,499,240 + 14407 mRNA_6039 0.18 -0.0
1,499,325 + 14407 mRNA_6039 0.24 -0.4
1,499,376 - 14407 mRNA_6039 0.28 0.1
1,499,424 + 14407 mRNA_6039 0.31 3.1
1,499,478 - 14407 mRNA_6039 0.35 -1.7
1,499,514 + 14407 mRNA_6039 0.37 0.2
1,499,573 - 14407 mRNA_6039 0.41 2.1