Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5992

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5991: 14359 - Hypothetical Protein, at 1398827 to 1400392 14359 mRNA_5992: 14360 - Hypothetical Protein, at 1400743 to 1402011 14360 mRNA_5993: 14361 - K12847 USP39, SAD1 U4/U6.U5 tri-snRNP-associated protein 2, at 1402184 to 1404821 14361

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,399,977 + 14359 mRNA_5991 0.73 1.1
1,400,016 - 14359 mRNA_5991 0.76 0.1
1,400,597 + -1.4
1,400,908 - 14360 mRNA_5992 0.13 1.2
1,400,918 - 14360 mRNA_5992 0.14 0.5
1,401,371 - 14360 mRNA_5992 0.49 0.5
1,401,386 + 14360 mRNA_5992 0.51 0.3
1,401,389 - 14360 mRNA_5992 0.51 0.1
1,401,513 - 14360 mRNA_5992 0.61 0.8
1,401,821 - 14360 mRNA_5992 0.85 2.1
1,401,910 + 0.1
1,402,306 + 0.0