Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5982

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5981: 14349 - Hypothetical Protein, at 1371994 to 1372598 14349 mRNA_5982: 14350 - KOG0379 Kelch repeat-containing proteins, at 1373446 to 1378307 14350 mRNA_5983: 14351 - Hypothetical Protein, at 1379005 to 1379613 14351

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,372,483 + 14349 mRNA_5981 0.81 0.3
1,372,585 + -0.3
1,372,656 + 0.3
1,372,721 + 0.6
1,372,777 - 1.6
1,372,798 + 0.2
1,372,963 - -0.4
1,373,706 + 2.0
1,373,891 + 1.7
1,374,408 + 14350 mRNA_5982 0.20 -0.6
1,374,428 + 14350 mRNA_5982 0.20 1.3
1,374,735 + 14350 mRNA_5982 0.27 1.3
1,374,739 - 14350 mRNA_5982 0.27 0.5
1,374,764 - 14350 mRNA_5982 0.27 0.3
1,374,837 + 14350 mRNA_5982 0.29 -0.2
1,374,954 + 14350 mRNA_5982 0.31 -0.2
1,374,976 - 14350 mRNA_5982 0.31 0.8
1,375,017 - 14350 mRNA_5982 0.32 1.5
1,375,050 + 14350 mRNA_5982 0.33 1.0
1,375,055 + 14350 mRNA_5982 0.33 1.4
1,375,080 + 14350 mRNA_5982 0.34 -1.3
1,375,716 + 14350 mRNA_5982 0.47 0.6
1,376,015 - 14350 mRNA_5982 0.53 -0.1
1,376,046 + 14350 mRNA_5982 0.53 0.3
1,376,171 - 14350 mRNA_5982 0.56 -0.2
1,376,269 + 14350 mRNA_5982 0.58 0.4
1,376,433 + 14350 mRNA_5982 0.61 0.3
1,376,443 + 14350 mRNA_5982 0.62 0.3
1,376,609 - 14350 mRNA_5982 0.65 0.3
1,376,754 + 14350 mRNA_5982 0.68 0.2
1,376,879 - 14350 mRNA_5982 0.71 0.7
1,376,896 + 14350 mRNA_5982 0.71 1.8
1,376,978 + 14350 mRNA_5982 0.73 -0.6
1,377,003 - 14350 mRNA_5982 0.73 1.4
1,377,110 - 14350 mRNA_5982 0.75 0.8
1,377,154 - 14350 mRNA_5982 0.76 0.0
1,377,170 + 14350 mRNA_5982 0.77 0.5
1,377,198 + 14350 mRNA_5982 0.77 1.1
1,377,562 + 14350 mRNA_5982 0.85 1.5
1,377,565 - 14350 mRNA_5982 0.85 0.8
1,377,586 - 14350 mRNA_5982 0.85 -1.3
1,377,592 - 14350 mRNA_5982 0.85 1.2
1,377,765 + 14350 mRNA_5982 0.89 1.1
1,377,993 + -0.2
1,378,052 + -0.0
1,378,178 - 0.6
1,378,196 + -0.1
1,378,199 + 1.6
1,378,239 + 1.0
1,378,295 - -0.6
1,378,303 + 1.5
1,378,350 - -0.2
1,378,646 + 0.1
1,378,650 - 0.1
1,378,673 - -0.4
1,378,779 - -0.8
1,378,793 - -0.2
1,378,800 - 0.9
1,378,811 + -2.2
1,378,811 + -2.6
1,378,814 - 1.1
1,378,821 + 1.0
1,378,824 + 0.8
1,378,825 + 0.5
1,378,846 + 0.4
1,378,848 - -0.1
1,378,848 - 0.4
1,378,949 - -1.2
1,379,081 - 14351 mRNA_5983 0.12 0.7