Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5945

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5944: 14312 - Hypothetical Protein, at 1293681 to 1295115 14312 mRNA_5945: 14313 - Hypothetical Protein, at 1295302 to 1296454 14313 mRNA_5946: 14314 - Hypothetical Protein, at 1296750 to 1297889 14314

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,294,464 - 14312 mRNA_5944 0.55 1.8
1,294,483 - 14312 mRNA_5944 0.56 -0.1
1,294,497 + 14312 mRNA_5944 0.57 -0.9
1,294,685 + 14312 mRNA_5944 0.70 0.7
1,294,747 + 14312 mRNA_5944 0.74 0.1
1,294,884 + 14312 mRNA_5944 0.84 0.3
1,295,031 - 1.2
1,295,042 - 0.3
1,295,066 - 0.2
1,295,150 - 2.0
1,295,638 - 14313 mRNA_5945 0.29 -0.2
1,295,666 - 14313 mRNA_5945 0.32 -1.2
1,295,814 + 14313 mRNA_5945 0.44 -1.0
1,295,936 - 14313 mRNA_5945 0.55 1.0
1,296,097 + 14313 mRNA_5945 0.69 0.5
1,296,214 - 14313 mRNA_5945 0.79 1.2
1,296,254 - 14313 mRNA_5945 0.83 0.6
1,296,363 + 1.8
1,296,363 + 1.8
1,296,403 + 1.2
1,296,517 - -1.0
1,296,936 - 14314 mRNA_5946 0.16 -1.8
1,297,088 + 14314 mRNA_5946 0.30 -0.6
1,297,090 - 14314 mRNA_5946 0.30 2.0
1,297,100 + 14314 mRNA_5946 0.31 0.1
1,297,251 - 14314 mRNA_5946 0.44 -0.0
1,297,261 + 14314 mRNA_5946 0.45 0.4
1,297,272 - 14314 mRNA_5946 0.46 0.6
1,297,365 - 14314 mRNA_5946 0.54 -2.5