Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5944

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5943: 14311 - Hypothetical Protein, at 1292366 to 1293493 14311 mRNA_5944: 14312 - Hypothetical Protein, at 1293681 to 1295115 14312 mRNA_5945: 14313 - Hypothetical Protein, at 1295302 to 1296454 14313

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,292,973 - 14311 mRNA_5943 0.54 0.4
1,293,126 + 14311 mRNA_5943 0.67 0.9
1,293,165 + 14311 mRNA_5943 0.71 0.4
1,293,277 + 14311 mRNA_5943 0.81 0.1
1,293,404 - 1.8
1,293,408 + 1.4
1,293,411 - -1.2
1,293,424 - 1.1
1,293,425 + -0.9
1,293,427 - 0.9
1,293,456 + -0.3
1,293,722 + -1.2
1,293,736 - -0.1
1,294,013 - 14312 mRNA_5944 0.23 1.1
1,294,464 - 14312 mRNA_5944 0.55 1.8
1,294,483 - 14312 mRNA_5944 0.56 -0.1
1,294,497 + 14312 mRNA_5944 0.57 -0.9
1,294,685 + 14312 mRNA_5944 0.70 0.7
1,294,747 + 14312 mRNA_5944 0.74 0.1
1,294,884 + 14312 mRNA_5944 0.84 0.3
1,295,031 - 1.2
1,295,042 - 0.3
1,295,066 - 0.2
1,295,150 - 2.0
1,295,638 - 14313 mRNA_5945 0.29 -0.2
1,295,666 - 14313 mRNA_5945 0.32 -1.2
1,295,814 + 14313 mRNA_5945 0.44 -1.0
1,295,936 - 14313 mRNA_5945 0.55 1.0
1,296,097 + 14313 mRNA_5945 0.69 0.5