Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5787

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5786: 14154 - Hypothetical Protein, at 939142 to 939826 14154 mRNA_5787: 14155 - Hypothetical Protein, at 940228 to 943427 14155 mRNA_5788: 14156 - HMMPfam-Ribosome biogenesis protein SLX9-PF15341, at 943585 to 944558 14156

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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939,842 - -1.2
939,983 + 0.4
940,137 - -0.1
940,151 + 1.0
940,192 + 0.0
940,307 + -0.7
940,326 + -0.2
940,326 - 0.6
940,472 + 1.3
940,608 + 14155 mRNA_5787 0.12 0.1
940,901 - 14155 mRNA_5787 0.21 0.3
940,914 - 14155 mRNA_5787 0.21 0.4
941,203 + 14155 mRNA_5787 0.30 0.6
941,360 + 14155 mRNA_5787 0.35 1.5
941,642 + 14155 mRNA_5787 0.44 0.3
941,903 - 14155 mRNA_5787 0.52 0.6
941,908 + 14155 mRNA_5787 0.53 -0.9
941,912 + 14155 mRNA_5787 0.53 0.5
942,006 - 14155 mRNA_5787 0.56 -0.5
942,496 + 14155 mRNA_5787 0.71 0.3
942,502 - 14155 mRNA_5787 0.71 1.1
942,890 - 14155 mRNA_5787 0.83 1.8
942,985 + 14155 mRNA_5787 0.86 0.3
943,557 + 2.0