Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5776

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5775: 14143 - Hypothetical Protein, at 918877 to 919776 14143 mRNA_5776: 14144 - HMMPfam-Phosphatidylinositol-specific phospholipase C, X domain-PF00388,ProSiteProfiles-Phosphatidylinositol-specific phospholipase X-box domain profile.-PS50007,SUPERFAMILY--SSF51695, at 920137 to 921765 14144 mRNA_5777: 14145 - Hypothetical Protein, at 921951 to 922623 14145

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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919,209 - 14143 mRNA_5775 0.37 -0.2
919,486 - 14143 mRNA_5775 0.68 -0.3
919,515 - 14143 mRNA_5775 0.71 0.2
919,646 - 14143 mRNA_5775 0.85 1.3
919,666 - 14143 mRNA_5775 0.88 0.3
919,726 - 0.1
919,767 - 0.3
919,951 + -0.1
919,973 - -2.3
919,973 - 1.1
919,988 - -0.4
919,997 + -0.3
919,998 - -0.4
920,004 + 0.2
920,013 + 0.0
920,030 + 2.6
920,043 - -0.2
920,069 + -0.1
920,131 + 0.6
920,315 + 14144 mRNA_5776 0.11 0.3
920,407 - 14144 mRNA_5776 0.17 -0.2
920,615 - 14144 mRNA_5776 0.29 0.1
920,616 + 14144 mRNA_5776 0.29 -0.0
920,637 + 14144 mRNA_5776 0.31 0.1
920,792 + 14144 mRNA_5776 0.40 0.8
920,895 + 14144 mRNA_5776 0.47 -1.8
920,987 - 14144 mRNA_5776 0.52 -0.6
921,239 - 14144 mRNA_5776 0.68 0.8
921,747 - -0.4
921,782 - 1.8
921,917 + 0.2
922,035 + 14145 mRNA_5777 0.12 0.5
922,192 - 14145 mRNA_5777 0.36 1.2
922,364 + 14145 mRNA_5777 0.61 -0.1
922,366 + 14145 mRNA_5777 0.62 0.1
922,378 - 14145 mRNA_5777 0.63 0.3
922,487 + 14145 mRNA_5777 0.80 0.1