Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5764

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5763: 14131 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF51004, at 884981 to 886323 14131 mRNA_5764: 14132 - K07404 pgl 6-phosphogluconolactonase, at 886498 to 887807 14132 mRNA_5765: 14133 - Interpro Promethin, at 888017 to 888883 14133

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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885,501 - 14131 mRNA_5763 0.39 -0.4
885,506 + 14131 mRNA_5763 0.39 0.7
885,522 - 14131 mRNA_5763 0.40 -0.4
885,528 + 14131 mRNA_5763 0.41 -0.3
885,834 + 14131 mRNA_5763 0.64 0.4
886,106 + 14131 mRNA_5763 0.84 -0.1
886,107 + 14131 mRNA_5763 0.84 1.7
886,151 + 14131 mRNA_5763 0.87 -0.5
886,227 - 1.9
886,229 - -0.2
886,243 - 0.2
886,257 + 0.1
886,301 - -1.4
886,374 + 1.8
886,377 + 0.3
886,395 - -0.1
886,401 + -0.6
886,406 + -0.9
886,501 + -0.6
886,641 - 14132 mRNA_5764 0.11 0.1
886,677 - 14132 mRNA_5764 0.14 -0.4
886,763 + 14132 mRNA_5764 0.20 1.0
886,884 + 14132 mRNA_5764 0.29 -1.7
887,180 - 14132 mRNA_5764 0.52 0.2
887,265 + 14132 mRNA_5764 0.59 1.4
887,292 + 14132 mRNA_5764 0.61 0.4
887,426 - 14132 mRNA_5764 0.71 -0.7
887,476 + 14132 mRNA_5764 0.75 -0.1
887,735 + -0.0
887,751 + -0.2
887,751 - 2.2
887,862 - -0.2
887,865 - -1.6
887,868 + -0.2
887,884 + 1.3
887,890 + 0.3
887,894 - 0.4
887,895 + 0.1
887,895 + -1.4
887,901 + 0.3
887,904 - -0.3
887,923 + 0.6
888,201 + 14133 mRNA_5765 0.21 1.9
888,513 + 14133 mRNA_5765 0.57 0.6
888,586 + 14133 mRNA_5765 0.66 3.2
888,611 + 14133 mRNA_5765 0.69 1.9
888,612 - 14133 mRNA_5765 0.69 0.5
888,628 + 14133 mRNA_5765 0.70 1.7
888,643 + 14133 mRNA_5765 0.72 0.6
888,733 - 14133 mRNA_5765 0.83 1.6
888,773 - 14133 mRNA_5765 0.87 -0.2