Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5754

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5753: 14121 - K17267 COPG coatomer subunit gamma, at 860617 to 864021 14121 mRNA_5754: 14122 - KOG1721 FOG Zn-finger, at 864214 to 867057 14122

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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864,013 - 0.4
864,202 - 2.6
864,954 + 14122 mRNA_5754 0.26 0.8
865,084 - 14122 mRNA_5754 0.31 0.8
865,215 + 14122 mRNA_5754 0.35 -0.6
865,988 + 14122 mRNA_5754 0.62 0.4
866,081 - 14122 mRNA_5754 0.66 -0.6
866,245 - 14122 mRNA_5754 0.71 1.3
866,252 + 14122 mRNA_5754 0.72 0.9
866,334 + 14122 mRNA_5754 0.75 -1.5
866,845 - -1.1
866,970 + -0.6
866,980 + 0.2
867,005 - -0.9
867,133 + 1.1
867,164 - -3.3
867,270 - -0.1
867,301 + -0.4
867,309 + 0.1
867,310 - 2.9
867,319 - 0.7
867,324 + -0.1
867,431 - -0.5
867,454 - 1.0
867,491 - -0.4
867,505 + -0.5
867,510 - 0.1
867,518 + -0.2
867,619 - -0.2
867,630 - 0.9
867,634 + 0.0
867,635 - 0.6
867,636 - 0.6
867,637 - 1.2
867,638 + -0.9
867,641 + 0.2
867,645 + 0.2
867,647 - 0.1
867,648 - -0.5
867,650 + 0.4
867,651 - 0.1
867,653 - 1.7
867,653 - 1.6
867,655 - -0.2
867,655 - 0.5
867,656 - -0.2
867,657 + 1.4
867,662 + -0.4
867,663 + -1.1
867,663 - -0.6
867,663 + 1.3
867,663 + 0.6
867,664 - -0.1
867,664 + -0.4
867,667 - 0.5
867,668 + 0.9
867,670 + -0.4
867,671 + 0.0
867,674 + -0.3
867,675 - -0.5
867,678 + -0.7
867,691 - -0.4
867,713 + 0.4
867,722 + 0.3
867,727 - -0.8
867,731 + -0.4
867,741 - 0.6
867,741 - -0.3
867,742 + -0.0
867,742 + -2.2
867,745 + -1.6
867,746 + -0.1
867,749 + -0.8
867,750 - -0.3
867,762 - -0.2
867,766 - -0.0
867,769 + -1.1
867,880 + 1.7
867,906 + 2.1