Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5751

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5750: 14118 - KOG2306 Uncharacterized conserved protein, at 853248 to 855227 14118 mRNA_5751: 14119 - K14708 SLC26A11 solute carrier family 26 (sodium-independent sulfate anion transporter), member 11, at 855663 to 858482 14119 mRNA_5752: 14120 - KOG0236 Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family), at 859339 to 859824 14120

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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854,934 + 14118 mRNA_5750 0.85 0.1
854,986 - 14118 mRNA_5750 0.88 -0.7
855,101 + -0.4
855,114 - 1.2
855,129 + -0.4
855,143 + 0.4
855,145 + 0.6
855,153 - -0.9
855,424 - 0.0
855,433 + 1.3
855,439 - 0.2
855,483 + 0.1
855,577 + -0.3
855,587 + -1.2
855,903 - 1.0
856,082 - 14119 mRNA_5751 0.15 1.1
856,129 - 14119 mRNA_5751 0.17 0.1
856,256 + 14119 mRNA_5751 0.21 1.1
856,296 + 14119 mRNA_5751 0.22 0.2
856,423 - 14119 mRNA_5751 0.27 1.5
856,681 - 14119 mRNA_5751 0.36 0.7
856,752 - 14119 mRNA_5751 0.39 -0.8
857,277 + 14119 mRNA_5751 0.57 0.0
857,749 - 14119 mRNA_5751 0.74 -0.9
857,853 - 14119 mRNA_5751 0.78 -0.4
858,012 + 14119 mRNA_5751 0.83 -1.0
858,040 + 14119 mRNA_5751 0.84 -0.5
858,344 - 1.8
858,468 - 1.2
858,599 - -1.0
858,627 + -1.0
858,680 - 0.0
858,712 - 0.7
858,761 + 0.8
858,761 - 0.7
858,784 + 0.2
858,787 + -0.2
858,802 - 0.1
858,812 + -1.4
858,818 + -0.8
858,914 + 0.3
858,917 - 0.4
858,925 - 0.4
858,946 - 0.0
859,002 + -0.1
859,038 - 1.1
859,041 - -0.3
859,063 + 0.6
859,106 - -0.1
859,107 + 1.1
859,235 - -0.3
859,247 + 0.7
859,250 - 1.7
859,354 + 0.6
859,357 + -2.2
859,379 - 0.8