Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5707

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5707: 14075 - Hypothetical Protein, at 736463 to 742238 14075 mRNA_5708: 14076 - KOG4774 Uncharacterized conserved protein, at 743079 to 743817 14076

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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735,501 + 1.4
735,512 + 1.5
735,820 + 0.6
735,937 + 1.1
736,516 - 0.7
736,523 + 2.1
736,560 + 0.0
736,724 + 2.2
736,974 - 1.6
737,434 + 14075 mRNA_5707 0.17 0.5
737,951 - 14075 mRNA_5707 0.26 0.3
738,261 - 14075 mRNA_5707 0.31 -0.3
738,434 + 14075 mRNA_5707 0.34 0.5
738,457 - 14075 mRNA_5707 0.35 1.1
738,556 - 14075 mRNA_5707 0.36 1.8
738,571 + 14075 mRNA_5707 0.36 0.2
738,708 - 14075 mRNA_5707 0.39 0.4
738,722 + 14075 mRNA_5707 0.39 1.1
738,943 - 14075 mRNA_5707 0.43 0.2
739,002 - 14075 mRNA_5707 0.44 0.5
739,751 + 14075 mRNA_5707 0.57 -1.7
739,768 - 14075 mRNA_5707 0.57 0.0
739,953 - 14075 mRNA_5707 0.60 0.8
739,963 + 14075 mRNA_5707 0.61 0.4
739,974 - 14075 mRNA_5707 0.61 0.3
740,008 - 14075 mRNA_5707 0.61 1.0
740,324 + 14075 mRNA_5707 0.67 3.0
740,397 - 14075 mRNA_5707 0.68 -1.8
741,321 - 14075 mRNA_5707 0.84 0.0
741,382 - 14075 mRNA_5707 0.85 0.8
741,453 - 14075 mRNA_5707 0.86 -0.3
741,757 + -0.0
741,824 - -0.5
742,051 - -0.1
742,185 - -0.0
742,271 + -0.8
742,393 + 0.6
742,438 - -1.1
742,556 - -0.4
742,559 + -0.5
742,582 + 1.8
742,602 + 0.5
742,717 + 0.6
742,723 - -0.2
742,744 + 0.9
742,761 - 0.1
742,860 - -0.2