Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5683

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5683: 14051 - K15505 RAD5 DNA repair protein RAD5, at 683055 to 687923 14051 mRNA_5684: 14052 - K07404 pgl 6-phosphogluconolactonase, at 687998 to 689292 14052

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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682,983 + -0.6
682,987 + 0.4
682,987 - -0.3
683,043 - -0.5
683,154 - 1.1
683,159 + -0.2
683,161 - -1.3
683,168 - 0.7
683,321 + 0.4
683,442 - -0.6
683,446 - -0.8
683,451 + -0.1
683,740 + 14051 mRNA_5683 0.14 0.7
683,766 - 14051 mRNA_5683 0.15 0.5
683,861 + 14051 mRNA_5683 0.17 0.7
684,026 - 14051 mRNA_5683 0.20 1.9
684,262 - 14051 mRNA_5683 0.25 0.5
684,745 - 14051 mRNA_5683 0.35 -0.6
684,745 - 14051 mRNA_5683 0.35 1.0
684,872 + 14051 mRNA_5683 0.37 0.9
684,878 - 14051 mRNA_5683 0.37 0.5
684,886 + 14051 mRNA_5683 0.38 0.7
684,910 - 14051 mRNA_5683 0.38 1.1
684,916 - 14051 mRNA_5683 0.38 -0.2
684,947 - 14051 mRNA_5683 0.39 -0.6
685,102 - 14051 mRNA_5683 0.42 -0.2
685,400 - 14051 mRNA_5683 0.48 2.1
685,455 - 14051 mRNA_5683 0.49 -0.1
685,673 - 14051 mRNA_5683 0.54 -1.1
685,772 + 14051 mRNA_5683 0.56 -0.5
686,055 + 14051 mRNA_5683 0.62 0.0
686,206 + 14051 mRNA_5683 0.65 1.7
686,230 - 14051 mRNA_5683 0.65 0.9
686,468 + 14051 mRNA_5683 0.70 2.1
686,992 - 14051 mRNA_5683 0.81 2.3
687,000 + 14051 mRNA_5683 0.81 1.6
687,144 + 14051 mRNA_5683 0.84 0.2
687,294 + 14051 mRNA_5683 0.87 0.0
687,367 + 14051 mRNA_5683 0.89 -0.0
687,490 + -0.5
687,504 + 0.2
687,609 - -0.8
688,016 + -0.0
688,169 - 14052 mRNA_5684 0.13 1.7
688,197 + 14052 mRNA_5684 0.15 -0.1
688,416 - 14052 mRNA_5684 0.32 1.3
688,488 - 14052 mRNA_5684 0.38 0.3
688,494 - 14052 mRNA_5684 0.38 -0.7
688,756 + 14052 mRNA_5684 0.59 -0.3
688,764 - 14052 mRNA_5684 0.59 -0.3
688,776 - 14052 mRNA_5684 0.60 0.1
688,778 - 14052 mRNA_5684 0.60 0.2
688,782 - 14052 mRNA_5684 0.61 -0.1
688,784 + 14052 mRNA_5684 0.61 -0.2
688,795 + 14052 mRNA_5684 0.62 -0.6