Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5606

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5605: 13973 - Hypothetical Protein, at 489927 to 490531 13973 mRNA_5606: 13974 - HMMPfam-Glycosyl hydrolase family 61-PF03443, at 490691 to 492139 13974 mRNA_5607: 13975 - HMMPfam-rRNA processing-PF08524, at 492643 to 493643 13975

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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489,814 + -0.3
489,951 + -1.9
490,908 + 13974 mRNA_5606 0.15 1.6
491,642 - 13974 mRNA_5606 0.66 -0.2
491,714 + 13974 mRNA_5606 0.71 1.0
491,893 + 13974 mRNA_5606 0.83 1.8
492,008 + 0.5
492,129 - -0.1
492,129 - 2.0
492,261 - -1.3
492,279 + 0.5
492,298 - 0.6
492,303 - 1.9
492,412 - -1.1
492,434 - 0.5
492,459 + -0.0
492,586 - 3.1
492,608 + -0.6
492,727 - -0.1
492,727 - 0.0
492,736 + 0.1
492,736 + -0.2
492,876 + 13975 mRNA_5607 0.23 -1.0