Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5545

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5545: 13913 - Hypothetical Protein, at 342333 to 343433 13913 mRNA_5546: 13914 - Hypothetical Protein, at 343568 to 344161 13914 mRNA_5547: 13915 - K08994 yneE putative membrane protein, at 344428 to 346193 13915

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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341,549 - -0.1
341,616 - 0.5
341,642 - 2.5
341,697 + 0.1
341,698 - -0.5
341,724 + 0.5
341,732 - -1.1
341,742 + -0.8
341,856 + -0.7
341,859 + -0.6
342,057 - -0.8
342,087 - 2.1
342,140 + 1.4
342,425 + -1.7
342,456 - 13913 mRNA_5545 0.11 -0.5
342,566 - 13913 mRNA_5545 0.21 0.6
342,741 - 13913 mRNA_5545 0.37 1.4
342,836 + 13913 mRNA_5545 0.46 -1.0
343,052 + 13913 mRNA_5545 0.65 1.5
343,182 + 13913 mRNA_5545 0.77 2.2
343,583 - 1.1
343,619 - -0.0
343,725 + 13914 mRNA_5546 0.26 -0.0
343,754 - 13914 mRNA_5546 0.31 1.1
343,801 + 13914 mRNA_5546 0.39 0.3
343,803 + 13914 mRNA_5546 0.40 -0.0
343,827 + 13914 mRNA_5546 0.44 -0.1
343,873 - 13914 mRNA_5546 0.51 -0.3
343,904 - 13914 mRNA_5546 0.57 -1.0
343,911 + 13914 mRNA_5546 0.58 0.1
343,930 - 13914 mRNA_5546 0.61 -0.5
343,966 - 13914 mRNA_5546 0.67 -1.2
343,989 - 13914 mRNA_5546 0.71 0.7
344,105 - 0.4
344,134 + -0.0
344,259 + 0.6
344,398 + -0.6